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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922079.1_cds_XP_016470883.1_63283
CDS Infomation

[gene=LOC107793114] [db_xref=GeneID:107793114] [protein=protein CLT3, chloroplastic-like] [protein_id=XP_016470883.1] [location=join(11228..11649,14795..14940,16127..16164,17205..17320,18192..18288,18402..18437,18601..18651,18734..18857,19208..19333,19438..19610)] [gbkey=CDS]
Sequence

ATGTCGATTTGTATTCGCCGGGTAATCACCGGCGAATTGTCGTCGCCGGTGAGCCGTCAT
GTTCCGGCAACAAAACTTCAATCTCGGTCATCGGTTCATCATGTTAACTTTAATCACCGG
CCGGCAATCATCAGCAGATCAATAACGACAAGATTTTACGTAATTGAGGCAGCGGAATTT
GCCGGTGTATTCCGCCGTGGCGGAGGAGGAAGCGGGAATGAGAAGTGGAGGAGGTTGTGT
GCGGTGGGAGATCAGGTGGTGGAGATTAATGATAGCCGGAAAAGTAGTGATCGGACGGCG
GAGATAATGGTTGCAGCGACAGCTACGGTGGTGCTAGGTGTAGGGAATCGGGTGCTTTAC
AAGCTGGCTTTAGTTCCTTTGAAGAACTATCCTTTCTTCCTGGCTCAGCTCGCCACTTTC
GGATATGTACTCGTATACTTCACTATCTTATATCTTCGGTATCATGCTGGCAAGGTCACT
GATGAAATGCTTTCCCTTCCAAAGACTCCATTTGTTGTTGTTGGTCTATTAGAGGCTCTC
GCCGCTGCGTCTGGCATGGCAGCTGGAGCTATTCTTTCAGGGGCCACAATTCCAATACTC
TCCCAGAGTTTTCTTGTCTGGCAACTTCTCCTGTCTTTTATATTCCTCGGGAGAAGATAT
AGTCTCAACCAGTTGTTTGGGTGCTTTCTCGTGGCTGTTGGTGTTATCATAACTGTAGCA
AGTGGATCTAGTGCTGGGTCTTTGATGGAAGCTGGAATATTTTGGAGTCTTTTGATGATA
GTCTCCTTTTTGTTCCAAGCTGCAGATACTGTCTTAAAGGAAGTAATATTCTTGGATGCT
GCTAAAAGACTGAAGGGAGGTACTGTTGATCTGTTTGTTGTGAACTCCTACGGATCTGCT
TACCAGGCAGTTTTTATATGCCTTCTCCTCCCATTTTTGTCGAAGTTGTGGGGCGTTCCA
TTTACTCAACTACCAAACTACCTTAGAGATGGTGCTGCATGCTTTTTGAACATCGGCACA
TTATCCGGTGGGTGCGATGGAGCACCTCTTTTACCGCTGCTGTTTATCATTGTAAACATG
GGTTTCAATATTTCATTGTTACACCTGCTTCAGATTTCCTCTGCTGTAGTATCTTGTCTC
GCATCAACAGTTTCAGTACCAATATCAGTTTTTTTATTCACATTGCCGTTACCATATCTT
GGAGTTGCATCCTCTCTCCCGCCTGGTTTCATAGCAGGAGCCATCATCCTTGTTCTGGGA
ATGCTTATTTATACTTGGAGACCATCAAGTCGCCTAAATAATCAGGAAATTGATAATTGC
CATTGCTAA

Peptide Sequence

PEP ID

XP_016470883.1
PEP Infomation

PREDICTED: protein CLT3, chloroplastic-like [Nicotiana tabacum]
Sequence

MSICIRRVITGELSSPVSRHVPATKLQSRSSVHHVNFNHRPAIISRSITTRFYVIEAAEF
AGVFRRGGGGSGNEKWRRLCAVGDQVVEINDSRKSSDRTAEIMVAATATVVLGVGNRVLY
KLALVPLKNYPFFLAQLATFGYVLVYFTILYLRYHAGKVTDEMLSLPKTPFVVVGLLEAL
AAASGMAAGAILSGATIPILSQSFLVWQLLLSFIFLGRRYSLNQLFGCFLVAVGVIITVA
SGSSAGSLMEAGIFWSLLMIVSFLFQAADTVLKEVIFLDAAKRLKGGTVDLFVVNSYGSA
YQAVFICLLLPFLSKLWGVPFTQLPNYLRDGAACFLNIGTLSGGCDGAPLLPLLFIIVNM
GFNISLLHLLQISSAVVSCLASTVSVPISVFLFTLPLPYLGVASSLPPGFIAGAIILVLG
MLIYTWRPSSRLNNQEIDNCHC

Transcript Sequence

Gene sequence data has not been registered.